Scripting Resources for DigitalMicrograph™

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Dave Mitchell's DigitalMicrograph™ Scripting Website

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Recent Updates

This is a list of script additions to this site in chronological order. Scripts may appear several times where updates or bug fixes get released.
9/5/24
A primer on using Jupyter Notebook.
PDF
       
25/3/23
A script-based implementation of Dual EELS which also permits dispersion calibration and measurement of non-uniformity in dispersion and HT stability.
Script Package
       
18/3/23
A function to read a Bruker Esprit EDS spectrum text file into a spectrum.
Updated Function
       
27/1/23
A function to apply a Gaussian fit to a 1D dataset.
Updated function
       
7/1/23
Fits an nth order polynomial to a 1D dataset.
New Function
7/1/23
Analyses cube axis HAADF images of ferroelectric materials to measure the displacement of atomic columns due to ferroelectric polarisation.
Updated Script
       
24/12/22
DigiScan capture tool, which provides a range of preset frame sizes, exposures, linesynch and signal selection options.
Updated Script
       
17/12/22

DigiScan capture tool, which provides a range of preset frame sizes, exposures, linesynch and signal selection options.
New Script
       
8/12/22
Carries out a Richardson-Lucy probe shape deconvolution to sharpen atomic resolution STEM images.
Updated Script
       
20/11/22
Removes the background of a 2D diffraction pattern by thresholding or modelling.
New Script
       
12/11/22
A plugin designed to monitor EDS detector performance.
Updated Plugin
12/11/22
A function which uses matrix maths to sum a 2D image along either its x or y axis.
New Function
       
29/10/22
Automatically measures resolution test images to obtain a resolution value for SEM, STEM etc.
Updated Script
29/10/22
Fits a lattice of circles to an experimental high resolution HAADF image. This lattice of circles can then be colourised to highlight defects etc.
Updated Script
       

24/10/22
Converts a series of 2D images into a 3D stack and allows stacks to be played as a movie.
Updated Script
       
9/10/22
Extracts the optimum regions of focus to create an in-focus 2D image from a 3D through-focus stack.
Updated Script
       
1/10/22
A Python script to allow camera length to be changed in TEM/Diffraction mode without pattern movement.
PyJEM Script
       
23/9/22
A Python script which provides access to a range of JEOL automatic alignment functions.
PyJEM Script
23/9/22
A Python script which configures the microscope into a beam showering condition.
PyJEM Script
       
21/9/22
A Python script which provides control of microscope apertures via the keyboard.
PyJEM Script
       
11/9/22
An example script which shows how to source detector info as a JSON dict file.
PyJEM Example Script
       
10/9/22
Example Python script which will insert/retract the HAADF detector and raise/lower the microscope screen.
PyJEM Example Script
10/9/22
Example Python dialog template containing a field, popup menu and pushbutton.
PyJEM Example Script
10/9/22
Example python script which creates a small dialog which can be used to monitor the microscope emission.
PyJEM Example Script
10/9/22
Example python script which shows how to select a microscope aperture and change its size.
PyJEM Example Script
       
6/9/22
A PDF guide which outlines how to install PyJEM and write some simple scripts.
PyJEM Tutorial
       
6/8/22
A script to compute the simplified phase contrast image from either one or a pair of images a differing defocus.
New Script
       
2/7/22
Example script which shows how to avoid the problem of images splitting into four transposed quadrants following mathematical operations in frequency space.
Example Script
       
17/6/22
An example script which shows how to convolve a blur vector with an image to create a blurred image and how to deconvolve said blur, to restore the image.
Example Script
17/6/22
A function to carry out linear regression of a 1D plot using matrices.
New Function
       
13/6/22
Captures and analyses diffraction patterns at each point in a 2D STEM scan.
Updated Package
       
11/6/22
A function which measures the intensity projection of an FFT about an angular range, to determine the angular positions of the various maxima.
New Function
11/6/22
An example script which shows how to calculate the Radon Transform and how to back-project it to reconstruct the original image.
Example Script
11/6/22
Carries out a Richardson-Lucy probe shape deconvolution to sharpen atomic resolution STEM images.
New Script
       
8/5/22
Captures and analyses diffraction patterns at each point in a 2D STEM scan.
Script Package
       
30/4/22
A tutorial which explains how to optimise tuning of the CEOS (probe) corrector.
Tutorial
       
31/3/22
An example script which shows how to control the beam position using DigiScan.
Example Script
       
30/3/22
An example script which shows how to acquire an image from a camera using the Cameramanager object.
Example Script
       
29/3/22
Example script which creates a chequerboard image of black and white squares.
Example Script
       
12/3/22
 Extract an Intensity Profile from Image Centre to Corner Function to extract an intensity profile from an image centre to its top right corner. New Function
12/3/22
Function to compute the linear regression on the passed in data.
Updated Function
       
26/2/22
Example script which shows how to source the coordinates of a rectangle or line ROI.
Example Script
26/2/22
Rebins folders of images.
Updated Script
       
5/2/22
Rebins folders of images.
New Script
23/12/21
Method to null microscope column distortion by using the objective stigmators to produce distortion-free diffraction patterns.
New Scripts
       
29/11/21
Synthesises a HAADF image which resembles a perovskite structure viewed down the [001] axis.
Updated Script
       
6/11/21
A script to acquire a sequence of images from a Gatan CCD automatically.
Updated Script
       
25/10/21
Finds an image using its title.
New Function
       
21/10/21
Example script which shows how to use the CameraManager commands to blank the beam.
Example Script
21/10/21
Function to replace outliers in a 1D data set with either the rolling mean or zero.
New Function
       
15/10/21
Captures a live profile image and saves it to a stack.
New Script
15/10/21
Computes a 2D contrast transfer function map.
New Script
       
14/10/21
Function which will remove elliptical distortion from a diffractogram/diffraction pattern.
New Function
       
12/10/21
Function which will compute the parameters of an ellipse which best fits a 2D array of points.
New Function
12/10/21
Analyses the front-most FFT (Thon ring pattern of an amorphous film) to determine the Cs and Defocus values.
New Script
       
21/9/21
Dialog-based script which uses a periodic thread to simulate a live camera view image.
New Script
       
4/7/21
An example script which shows how to find a Camera View image and either stop or start/restart it.
Example Script
       
1/7/21
Function to find an open image from an added tag
Updated Function
1/7/21
Adjusts the frame and content size of all open images, to maximise their view.
New Script
       
7/3/21
Sorts a taglist of filenames in a directory into numerically ascending order.
New Function
7/3/21
Function to return a taglist listing all the dm4 and tiff files in a directory.
New Function
       
6/3/21
Function to convert an imagedocument containing multiple images into a single (flat) image.
New Function
6/3/21
Creates an aligned montage from previously acquired images or raw (unaligned) montages.
New Script
       
13/2/21
Flips all currently open images about the selected axis and then saves them to the chosen directory.
New Script
       
31/12/20
Shows how to get a dialog to start and stop a thread, and how to have that thread communicate with the dialog - to source information, such as values in fields and to reset buttons, LEDs etc.
Updated Example
       
12/12/20
Drives an SEM or STEM stage in an X-Y raster while capturing scanning images using DigiScan to build up a large area montage.
Updated Script
       
30/10/20
Reduces the horizontal banding found in images acquired on cold FEG systems, where the emission undergoes stochastic changes.
Updated Script
       
18/9/20
Fits a lattice of circles to an experimental high resolution HAADF image. This lattice of circles can then be colourised to highlight defects etc.
New Script
       
5/9/20
Script to measure and correct distortion in an image containing a geometric array of features.
Updated Script
       
29/8/20
Fits an ROI to a live Camera View image (if the image is not 2^n x 2^n - where n is an integer). It then creates a live reduced FFT fitted with a series of yellow concentric circles, to aid correction of objective astigmatism.
Updated Script
       
22/8/20
Computes the high frequency dielectric constant from Epsilon 2 data.
New Script
22/8/20
Creates a Unique Experimental ID (UEID) taggroup for linking files.
New Function
       
15/8/20
Estimates the temperature rise in the foil due to electron beam irradiation.
Updated Script
       
1/8/20
Provides a library of CL (cathodoluminescence) commands to enable offline development of CL-based scripts.
Updated Library
1/8/20
Provides a library of DigiScan commands to enable offline development of DigiScan-based scripts.
Updated Library
1/8/20
Provides a library of imaging filter commands to enable offline development of GIF-based scripts.
New Library
1/8/20
A dialog-based script which can be used to monitor and edit the settings which are used by the Faux hardware libraries eg Faux Camera.
New Script
1/8/20
Provides a library of camera manager commands to enable offline development of camera-based scripts.
Updated Library
1/8/20
 Distortion Correction
Measures and corrects distortion in images of periodic structures.
Updated Script
       
25/7/20
A library of faux microscope control functions to enable offline script development for microscope-based scripts.
New Library
       
12/11/20
Provides a GUI for installing and updating packages of scripts.
Updated Script
       
11/7/20
A suite of tools which allow calibration, enhancement, formatting, measurement and analysis of selected area electron diffraction patterns, as well as calculation of simple crystallographic data.
Updated Package
       
27/6/20
 Stage Through Focus Acquisition Acquires a 3D Stack of through-focus images on an SEM equipped with DigiScan, by stepping the stage. Read the warnings accompanying this script. New Script
27/6/20
 Scripting Commands Listing A PDF of the majority of script commands as a PDF - which can be quickly searched for keywords. PDF File
       
30/5/20
Extracts the optimum regions of focus to create an in-focus 2D image from a 3D through-focus stack.
New Script
30/5/20
This function will compute the linear least squares fit of a 2D polynomial to a surface described by the intensity values in an image.
New Function
       
16/5/20
Report the magnifications used to acquire images in a folder.
Updated Script
       
9/5/20
A short example script which shows how to deconvolute a Gaussian-shaped peak from a signal using FFT methods.
Example Script
       
2/5/20
Provides a CCD acquisition control panel with two sets of acquisition conditions.
New Script
       
24/4/20
 SI Dismantler Dismantles a spectrum image into its component spectra. Updated Script
       
29/3/20
Script which periodically captures CCD or STEM images and uses cross correlation to measure the specimen drift. A cross correlation image, a vector plot (showing the direction and magnitude of the drift) and a plot of the instantaneous drift rate is displayed.
Updated Script
       
9/2/20
Saves a selected taggroup as a settings file as a backup for subsequent upload or migration to another instance of DigitalMicrograph.
Updated Script
9/2/20
Creates a unique timestamp string.
New Script
       
12/1/20
Applies a linear shear to an image to remove the effects of drift.
 Updated Script
       
1/12/19
Provides a GUI for installing and updating packages of scripts.
Updated Script
       
30/11/19
Tutorial on converting DM stacks (3D Images) into movies.
New Tutorial
       
24/11/19
Applies a Wiener or Average Background Subtraction Filter to remove contributions from amorphous phases to HRTEM and STEM images.
Updated Script
       
16/11/19
Saves a selected taggroup as a settings file for subsequent upload or migration to another instance of DigitalMicrograph.
New Script
       
2/11/19
Removes the flags and skips (STEM scan instabilities) from high resolution images.
New Script
       
26/10/19
Function to carry out a linear regression to calculate the best 2D plane fit to an image.
New Function
       
23/10/19
Applies a Butterworth filter prior to computing the FFT or Reduced FFT, to remove streaks in an FFT caused by the image edges.
New Script
       
19/10/19
Applies a linear shear to an image to remove the effects of drift.
New Script
       
5/10/19
Measures and corrects distortion in images of periodic structures.
New Script
       
22/9/19
This function will extract a sub-string from a tab-delimited string, using the tab positions specified.
New Function
       
14/9/19
An example script which shows how to transform (stretch, rotate etc) a set of coordinates using matrix manipulation.
New Example
       
10/9/19
An interactive tool for extracting intensity profiles from suites of x-ray, EFTEM maps etc.
Updated Script
       
9/9/19
Captures continuously the front-most live image (TEM, STEM etc) into a 3D Stack or to disk.
New Script
       
7/9/19
This function computes a 2D polynomial fit mapping the relationship between two 2D arrays of points.
New Function
       
11/8/19
A suite of tools which allow calibration, enhancement, formatting, measurement and analysis of selected area electron diffraction patterns, as well as calculation of simple crystallographic data.
Updated Package
       
6/8/19
Uses an ellipse fitting method to analyse selected area electron diffraction patterns from polycrystalline materials. Identifies and corrects any elliptical distortion which may be present.
Updated Package
       
3/8/19
Function to find an open image from an added tag
New Function
3/8/19
Script to remove empty white lines from a saved script file.
New Script
       
28/7/19
Script to scale the intensity of subareas of an image. These can be defined by oval/box annotations or rectangular/freehand ROIs.
New Script
28/7/19
A function to create a colour lookup table (CLUT) on a temperature scale.
New Function
28/7/19
Applies an intensity wedge to flatten uneven brightness in an image, such as that arising from thickness variations.
Updated Script
       
29/6/19
Excises a smaller stack from a larger stack.
New Script
29/6/19
A simple countdown timer to keep track of time-dependent processes at the microscope.
Updated Script
       
8/6/19
An example script which shows how to add and control bandpass filters using script-. These are normally added via the FFT masking tools in the menu.
Example Script
8/6/19
An example script which shows how to select a camera using the ObjectList object returned from the Camera Manager.
Example Script
       
25/5/19
Levels out low frequency variations in brightness in the image, such as those due to thickness gradients in the specimen.
New Script
       
19/5/19
Captures sequences of STEM images using either slow or fast acquisition modes. Images can be used for: time-lapse imaging; drift-corrected summing to remove the drift-induced shearing found in single, long-exposure images; making standalone AVI movie files (using ImageJ), enabling the STEM imaging of dynamic effects.
Updated Script
       
12/10/19 Countdown Timer A simple countdown timer to keep track of time-dependent processes at the microscope. Updated Script
       
17/4/19
The Hanning Window filtering function creates a bell-shaped function with a value of unity in the centre and zero at the edges.
New Function
17/4/19
A script which shows how to create a filtering mask from conventional FFT masks and other components such as oval annotations, rectangular and freehand drawn regions of interest.
Example Script
17/4/19
Shifts the SADP centre to the geometric centre of the image.
New Script
17/4/19
Dismantles a spectrum image into its component spectra.
New Script
17/4/19
An image processing filter which retains only the high frequency components in an image.
New Script
       
24/3/19
A simple countdown timer to keep track of time-dependent processes at the microscope.
New Script
       
17/3/19
Finds the coordinates of a point a given distance along a line.
New Function
       
23/2/19
Provides a library of camera manager commands to enable offline development of camera-based scripts.
New Library
       
6/1/19
Script to create a continuously updating/changing image using a background thread.
Updated Script
       
28/12/18
Exports all open spectra as two column tab delimited text.
Updated Script
28/12/18
A script to acquire a sequence of images from a Gatan CCD automatically.
Updated Script
28/12/18
An edge-finding filter.
New Script
       
14/12/18
A script to acquire a sequence of images from a Gatan CCD automatically.
New Script
       
2/12/18
 Acquire Rotate and Crop Acquires an image from a CCD camera, then rotates the image and crops it to eliminate the black space introduced by rotation. Updated Script
       
7/10/18
An example script to show how to use an event listener from within a dialog.
Example Script
       
6/10/18
Rebins an image by an integer value between 2 and 8.
Updated Script
6/10/18
Function which resizes the x and y axes of a passed-in image by any non-integer factor.
New Function
       
2/9/18
An example script based on Gatan's demonstration code which shows how to capture the position of mouse clicks.
Example Script
       
1/9/18
A suite of tools which allow calibration, enhancement, formatting and measurement of selected area electron diffraction patterns, as well as calculation of simple crystallographic data. Updated in v6 to be compatible with GMS 3.30.
Updated Package
       
20/7/18
Imports spectra downloaded from the EELSdb Database as .msa files into DigitalMicrograph
New Script
       
30/6/18
Performs circular Hough transform-based automatic measurement of polycrystalline ring diffraction patterns. Updated in this version to be compatible with GMS 3.22.
Updated Script
       
25/6/18
Monitors the temperature of a CCD camera either indirectly from the dark counts produced by the camera (universally applicable) or from temperature information sourced directly from the camera controller (only supported on newer controllers).
New Script
       
21/4/18
Creates file names for images and spectra using user-defined terms and microscope information to expedite the saving of data.
Updated Script
       
25/2/18
Calculates the appropriate EELS spectrometer dispersion and drift tube (or Offset) voltage for a target set of EELS conditions.
New Script
       
17/2/18
 HRTEM Filter Applies a Wiener or Average Background Subtraction Filter to remove contributions from amorphous phases to HRTEM and STEM images. Updated Script
       
28/1/18
A suite of tools which allow calibration, enhancement, formatting and measurement of selected area electron diffraction patterns, as well as calculation of simple crystallographic data.
Updated Package
       
24/12/17
Exports all open spectra as two column tab delimited text.
Updated Script
       
2/12/17
An example script which shows how to use these intrinsic image variables.
Example Script
2/12/17
Computes the contrast transfer function from the supplied microscope parameters.
Updated Script
2/12/17
A function which will rebin the passed in image by any value between 1 and 16, including non-integer values.
New Function
       
18/11/17
 Drift Tube Scanning Scans the GIF drift tube voltage to and fro as a background thread. New Script
       
24/9/17
Analyses cube axis HAADF images of ferroelectric materials to measure the displacement of atomic columns due to ferroelectric polarisation.
Updated Script
       
17/9/17
Imports x-ray, phase and PCA maps and linescans from Noran System Seven and colours them. Some other map file formats are also supported.
Updated Script
17/9/17
Allows the size, colour and font of the foremost image's scale bar to be changed and propagated to all other open images.
Updated Script
       
12/8/17
Drives an SEM (or TEM) stage in an X-Y raster while capturing scanning images using DigiScan to build up a large area montage.
New Script
       
30/7/17
Applies a Wiener or Average Background Subtraction Filter to remove contributions from amorphous phases to HRTEM and STEM images.
Updated Script
       
15/7/17
Captures sequences of STEM images using either slow or fast acquisition modes. Images can be used for: time-lapse imaging; drift-corrected summing to remove the drift-induced shearing found in single, long-exposure images; making standalone AVI movie files (using ImageJ), enabling the STEM imaging of dynamic effects.
Updated Script
15/7/17
Synthesises a HAADF image which resembles a perovskite structure viewed down the [001] axis.
Updated Script
       
8/7/17
Performs circular Hough transform-based automatic measurement of polycrystalline ring diffraction patterns. Updated in this version to be compatible with GMS 3.
Updated Script
       
18/6/17
Tutorial describing how to install GMS 2 and 3 along with troubleshooting tips when license installation does not go to plan.
Updated Tutorial
       
10/6/17
Function which will excise the largest possible rectangular region from an image which has been rotated.
New Function
       
20/5/17
Synthesises a HAADF image which resembles a perovskite structure viewed down the [001] axis.
New Script
       
8/4/17
An example script to show how to use a background thread to monitor a folder for a change - when the change is detected it triggers a response in DM.
Example Script
       
12/3/17 Change JEOL TEM Screen Page Provides toolbar buttons to select various pages on the JEOL in-built control screen, raise and lower the fluorescent screen and update the calibration on a Live View image. Updated Script
       
19/2/17
Saves all the currently open images to the selected directory as 8 bit TIFF images at full resolution.
Updated Script
19/2/17
Reports the length of the selected line to four decimal place precision.
New Script
       
5/2/17
Removes the horizontal striping which can occur in images, due to fluctuations in the output of cold FEG electron gun.
Updated Script
5/2/17
An example script which shows how to acquire a live image and convert it to a spectrum.
Example Script
       
30/12/16
Function to carry out Gaussian Blurring in Fourier Space
Updated Script
       
19/10/16
Equalise the intensity difference across two halves of an image caused by CCD readout calibration errors.
New Script
       
1/10/16
Scripts to enable the acquisition of through-focus image series in TEM or STEM mode.
New Script
       
10/09/16
Script to create a continuously updating/changing image using a background thread.
New Script
       
03/09/16
A suite of tools with which to process spectra and spectrum images - especially EELS.
Updated Package
       
28/8/16
Automatically measures resolution test images to obtain a resolution value for SEM, STEM etc.
New Script
28/8/16
Measures the fractal dimension of an image to convert regions with different textures into different greyscales.
New Script
       
30/7/16
A function to refine a set of values by removing outliers until a target error is reached or a minimum number of points remain.
New Function
       
17/7/16
A suite of tools for measuring and processing selected area electron diffraction patterns. New functionality added in v4.0
Updated Package
       
16/7/16
An example script which shows how to use the taglist structure to store lists of information.
Example Script
16/7/16

An example script which shows how to use the UID script object.
Example Script
       
5/7/16
A function which will read in a Bruker EDS spectrum file which has been exported in text format.
Updated Script
       
4/7/16
Measures the angle defined by three successive mouse positions on an image.
Updated Script
       
26/6/16
Provides toolbar buttons to select various pages on the JEOL in-built control screen and raise and lower the fluorescent screen.
Updated Script
26/6/16
Report the acquisition times for a series of open images.
New Script
       
12/6/16
A computationally efficient filter for smoothing spectra while retaining peak shape.
New Script
12/6/16
Warps an EELS Momentum-Energy map to remove the distorting effects of GIF aberrations about a horizontal centreline.
New Script
12/6/16
Takes an image area defined by a region of interest (ROI) and cross correlates it with the whole image.
New Script
       
4/6/16
Function to compute the standard deviation (sigma n-1) of an image, or a set of values passed in as pixel values in an image. The number of data points (n), the mean and the sum are also returned.
Updated Function
       
21/5/16
Acquires an image from a CCD camera, then rotates the image and crops it to eliminate the black space introduced by rotation.
New Script
       
10/4/16
Provides a control panel for controlling the HT on older JEOL microscopes which use serial communication interfaces. 'Read the warnings accompanying this script'.
New Script
       
25/3/16
Inverts the contrast of the front-most image. In binary-valued images, 0 become 1 and vice versa. In greyscale images the minimum becomes the maximum and vice versa, with everything in between scaled appropriately.
Updated Script
       
14/3/16 Objective Astigmatism Helper Fits an ROI to a live Camera View image (if the image is not 2^n x 2^n - where n is an integer). It then creates a live reduced FFT fitted with a series of yellow concentric circles, to aid correction of objective astigmatism. Updated Script
       
11/2/16 File Name Creator Creates file names for images and spectra using user-defined terms and microscope information to expedite the saving of data. Updated Script
       
30/1/16
 File Name Creator Creates file names for images and spectra using user-defined terms and microscope information to expedite the saving of data. New Script
       
23/1/16
Saves EELS experimental conditions (alpha and beta) to the local computer and allows them to be applied to spectra or spectral images.
New Script
       
16/1/16
A library of DigiScan commands to enable script development of DigiScan-based scripts without working at a microscope system.
New Library
       
10/01/16
Drives the beam tilts of a microscope to enable hollow cone, raster, arc and rocking scanning - as well as manual control.
New Script
       
28/12/15
A suite of software tools with which to process Spectrum Images.
Updated Package
       
9/11/15
Captures a z stack of images acquired at various wavelengths of the CL Spectrometer.
New Script
       
7/11/15
A simple dialog-based script which will recalibrate the front-most diffraction pattern in a range of different units.
New Script
7/11/15
Measure average feature dimensions such as film thicknesses, by drawing multiple lines across the regions of interest.
Updated Script
       
5/11/15
Uses an ellipse fitting method to analyse selected area electron diffraction patterns from polycrystalline materials. Identifies and corrects any elliptical distortion which may be present.
New Package
       
26/9/15
Captures time-lapse STEM images using slow acquisition and fast acquisition stacks using continuous acquisition.
New Script
       
12/9/15
Scales and shifts the front slice of a spectrum containing two overlaid spectra, to minimise the difference between them and display the difference.
New Script
       
5/09/15
A library of faux CL (cathodoluminescence) functions to enable offline script development for CL-based scripts.
Library
5/09/15
Extracts and displays each slice in a composite EELS spectrum as stand-alone spectra.
New Script
       
23/8/15
Analyses cube axis HAADF images of ferroelectric materials to measure the displacement of atomic columns due to ferroelectric polarisation.
New Script
       
15/8/15
Fits a 2D Gaussian to a blob feature - such as diffraction spot or atomic column - to locate its centroid with sub-pixel accuracy.
New Script
       
7/8/15
Function to find the centre of gravity of the passed in image.
Function
       
2/8/15
A suite of scripts with which to automate measurement of images (SEM or Optical) of diffraction gratings or other regular periodic structures.
New Script
2/8/15
Exports an image display as an RGB image.
Example script
       
26/7/15
Creates a 2D Gaussian blob image for fitting to a diffraction spot or atomic column.
Function
       
24/5/15
Creates, splits, sums and aligns 3D stacks, such as a spectrum images.
Updated Script
       
2/5/15
Imports x-ray, phase and PCA maps and CSV Linescans from Noran System Seven and colours them.Some other file formats are also supported.
Updated Script
       
22/4/15
Script which periodically captures CCD or STEM images and uses cross correlation to measure the specimen drift. A cross correlation image, a vector plot (showing the direction and magnitude of the drift) and a plot of the instantaneous drift rate is displayed.
Updated Script
       
11/4/15
Fits a double atan function under EELS white lines to model the continuum, enabling the white line intensities to be determined.
Updated Script
       
4/4/15
Processes x-ray dot maps to eliminate background dots (low density of dots) but retain dots in regions which contain the element of interest (high density of dots) and if necessary - fill in this area by dilation.
Updated Script
       
28/3/15
Imports x-ray, phase and PCA maps from Noran System Seven and colours them.Some other file formats are also supported.
New Script
28/3/15
Exports all open spectra as two column tab delimited text.
Updated Script
       
15/3/15
Function to excise the largest possible central square (power of 2) region of an image.
Function
15/3/15
Shows how to create a sub-dialog from within a dialog with interactive buttons and fields.
Example Script
       
14/3/15
Shows how to call up the colour selection tool and apply the colour to an image.
Example Script
14/3/15
A batch importation utility to read in text files saved in CSV format (comma separated values), from Noran System 7 EDS software.
Updated Script
       
8/3/15
Creates a periodic table with elements as buttons which report chemical information.
Example Script
       
7/3/15
A suite of software tools to process Spectrum Images.
Updated Package
       
28/2/15
Reports the TEM and STEM magnifications used to acquire a folder of images.
Updated Script
28/2/15
Imports the data from a JEOL EDS EMSA spectrum file into a spectrum.
New Script
       
31/1/15
Shows how to add an event listener to an image. This image is subsequently updated by a background thread - which repeatedly triggers the event listener.
Example Script
       
24/1/15
Uses an ROI on an EELS spectrum to fit an exponential background which can be adjusted dynamically.
New Script
24/1/15
Provides buttons to select various pages on the JEOL in-built control screen.
New Script
       
18/1/15
Function to read the Gatan license information. This might be used to protect a script or package of scripts.
New Script
18/1/15
Saves all open images in Gatan .dm3 format, with a common name and counter.
New Script
18/1/15
Shows how to source information from the taggroup of an image and save it as a text file.
Example Script
       
4/1/15
Function to zoom the passed in image to the size specified and centre it within the image frame.
Function